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The ancestor of the genus Mabuya arrived to South America from Africa during the Mid-Miocene by means of long-distance transmarine colonization, most probably following the South Equatorial Current. The Oligocene and early Miocene periods were dominated by dramatic climatic change and Andean orogeny, therefore, it has been suggested that these factors might have played an important role in the origin of diversity found in tropical rainforests Gamble et al. The frequency of any particular clade among the individual trees contributing to the consensus tree represents the posterior probability of that clade Huelsenbeck and Ronquist, Topological incongruence among partitions was tested using the incongruence length difference ILD test Michkevich and Farris, ; Farris et al. In the present work, we have assembled a new molecular data set that includes most species of Neotropical Mabuya in order to further investigate the phylogenetic position of M. Table 1 continued.{/INSERTKEYS}{/PARAGRAPH} This journey, which involves a transatlantic crossing of more than km, was repeated on at least one other occasion by the ances- tor of Trachylepis atlantica , endemic to the island of Fernando de Noronha Mausfeld et al. Of these, cor- respond to specimens belonging to the Mabuya nigropunctata species complex. DNA contamination. Such a taxonomic splitting is nevertheless contro- versial, Jesus et al. Information on the locality, voucher availability and GenBank accession numbers for all the sequences used is shown in Table 1. Molecular study. Four incrementally heated Markov chains with the default heating values were used. Manaus 03 30,9 0 S ; 59 54,2 0 W a Castanho, S. Phylogenetic analyses were carried out using maximum-likeli-. Carranza and Arnold , Vrcibradic et al. In this test, 10, heuristic searches were carried out after removing all invariable characters from the data set Cunningham, Estimation of divergence times. Phylogenetic analyses using up to base pairs bp of mitochondrial DNA from specimens of Neo- tropical Mabuya , including 18 of the 19 recognized South American and Mesoamerican species, indicate that most species of the genus are monophyletic, including M. Reptiles and amphibians are excellent model organisms for the investigation of historical pat- terns in Amazonia because they present low dispersal capabilities in comparison to other vertebrate groups such as birds and mam- mals, are relatively abundant and easy to capture, and seem to be affected by both geographic and climatic events Gamble et al. Miralles , salvador. Materials and methods. Miralles, S. A total of specimens were included in the present study. The evolutionary rates calculated previously were applied to a. The split between M. C , 58 C , 72 C for 30 cycles; 72 C The complete mitochondrial cytochrome b cyt b gene approxi-. The present results shows that this species includes three highly divergent and largely allopatric lineages restricted to occidental, meridional, and oriental Amazonia. Despite the fact that some of these characters might be hypothesized as putative apomorphies supporting the monophyly of both M. Characters examined here are routinely used in taxonomy of Scincidae, such as scale counts, presence or absence of homologous scale fusions or the variability in color patterns. The calculated evolutionary rates for other lizard groups 1. As a result of the wide distribution range of M. We included the maximum number of specimens in our morphological comparisons in order to 1 emphasize the remarkable morphological divergence existing between M. ZFMK MNHN E LG E a. To re-establish. For instance, a very common pattern observed in Amazonian taxa is a split between lineages that correspond to the eastern and western Amazon basin, although it has been shown that this split might not be the result of a common vicariant event in all taxa Gamble et al. Of these were representatives of the Neotropical genus Mabuya and included 18 members of the 19 South American and Meso- american species and 2 out of the 7 Caribbean species recognized. Unfortunately, there are no internal calibration points available. Our dataset demonstrates that previous claims regarding the paraphyletic status of M. These rates range from 1. These sequences were translated into amino. Miralles a , b , S. These authors placed the species of the Cape Verde archipelago in the genus Chioninia , the Asian species. All analyses started with randomly generated trees and ran for 2. Cyt b. For the mitochondrial cytochrome b sequences no gaps. As a result, and in order to have an idea of the approx- imate time of the different cladogenetic events of our phylogeny,. Table 1 List of specimens, collection and accession numbers of the sequences with their references, and localities. The computer program JModel-. For the combined analysis each par- tition had its own model of sequence evolution and model parameters see above. One of the most intriguing results of Whiting et al. E-mail addresses: miralles. The genus Mabuya was one of the largest genera of the family Scincidae, and the only skink genus with a circumtropical distribu- tion Greer and Broadley, ; Greer and Nussbaum, , until it was divided into four units, according to a molecular phyloge- netic analysis using partial sequences of the mitochondrial 12S and 16S rRNA genes and the geographic distribution of each unit Mausfeld et al. Molecular analyses. Although the taxonomy of the supergroup Mabuya sensu lato is still not totally resolved see Carranza and Arnold, ; Jesus et al. Porto Walter, inland from the. This transformed the ref-. Test Posada, was used to select the most appropriate model of sequence evolution using the Akaike information criterion. Phylogenetic analyses. Article history:. Manaus 03 30,9 0 S ; 59 54,2 0 W b Castanho, S. {PARAGRAPH}{INSERTKEYS}Molecular Phylogenetics and Evolution 54 — Contents lists available at ScienceDirect. The authors of that work, however, errone- ously referred to M. Although M. Speciation between Mabuya carvalhoi , endemic to the coastal mountain range of Venezuela, and M. Rather, our data support the hypothesis that the late tertiary essentially Miocene epoch was a period that played a very important role in the generation of biological diversity in the Amazonian forests. Lesser Antilles Lesser Antilles. Manaus 03 30,9 0 S ; 59 54,2 0 W d Castanho, S. Molecular Phylogenetics and Evolution. Reliability of the ML trees was assessed by bootstrap analysis Felsenstein, , involving replications. Apart from the strange position of M. Morphological study. LG Rio Abiseo 07 21 0 DQ DQ EU AY LG LG GQ GQ EU DQ EU EU Not collected. Genbank accession numbers of new sequences obtained for this study are in bold; all the rest are from Kumazawa and Nishida , Honda et al. Of these, two sequences for a specimen of M. The approximately 26 recognized species of the genus Mabuya are widespread across much of the continent, as well as on many offshore islands, and constitute an important component of South American lizard communities Miralles, One of the species of Mabuya with the largest distribution range is M. Upon scaling the NPRS tree with an arbitrary. All rights reserved. This species was included in a recent phylo- genetic analysis by Whiting et al. Manaus 03 30,9 0 S ; 59 54,2 0 W e. Of these, sequences were newly produced for. Additionally, 58 individuals including representative of the remaining 19 Neotropical species were added in order to test the monophyletic status of M. This result was totally unexpected as these two species are very distinct from a morphological point of view, each one of them being easily diag- nosable from the other, and having their own distinctive charac- ters, allegedly to be derived Miralles et al. Although some gaps were postulated in order to resolve length. Systematics and biogeography of the Neotropical genus Mabuya , with special emphasis on the Amazonian skink Mabuya nigropunctata Reptilia, Scincidae.